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Peptidoglycan biosynthesis

State Icon Reaction EC-Number Confidence maximal confidence score from EnzymeDetector
undecaprenol + ATP <=> H+ + undecaprenyl_phosphate + ADP 2.7.1.66 undecaprenol kinase

UDP-MurNAc-pentapeptide + undecaprenyl_phosphate <=> Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol + UMP 2.7.8.13 phospho-N-acetylmuramoyl-pentapeptide-transferase

UDP-MurNAc-L-Ala-D-Glu + L-lysine + ATP <=> H+ + phosphate + UDP-MurNAc-Ala-D-Glu-Lys + ADP 6.3.2.7 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---L-lysine ligase

UDP-MurNAc-Ala-D-Glu-Lys + D-Ala-D-Ala + ATP <=> H+ + UDP-MurNAc-pentapeptide + phosphate + ADP 6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
6.3.2.4 D-alanine---D-alanine ligase


2 Glycyl-tRNA(Gly) + N-acetylmuramoyl-L-alanyl-D-isoglutaminyl-L-lysyl-(N6-triglycyl)-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine <=> 2 tRNAMet + N-acetylmuramoyl-L-alanyl-D-isoglutaminyl-L-lysyl-(N6-pentaglycyl)-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine 2.3.2.18 N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-(N6-triglycine)-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine:glycine glycyltransferase

D-alanine + ATP <=> H+ + D-Ala-D-Ala + phosphate + ADP 6.1.2.1 D-alanine---(R)-lactate ligase
6.3.2.35 D-alanine---D-serine ligase
6.3.2.4 D-alanine---D-alanine ligase



undecaprenyl_diphosphate + H2O <=> H+ + undecaprenyl_phosphate + phosphate 3.1.3.27 phosphatidylglycerophosphatase
3.6.1.27 undecaprenyl-diphosphate phosphatase


UDP-N-acetylmuramate + NAD+ <=> UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine + NADH + H+ 1.3.1.98 UDP-N-acetylmuramate dehydrogenase

ATP + GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol + NH3 <=> ADP + phosphate + Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-D-isoglutaminyl-L-lysyl-D-alanyl-D-alanine 6.3.5.13 lipid II isoglutaminyl synthase (glutamine-hydrolysing)

UDP-N-acetyl-D-glucosamine + phosphoenolpyruvate <=> UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine + phosphate 2.5.1.7 UDP-N-acetylglucosamine 1-carboxyvinyltransferase

UDP-N-acetylmuramoyl-L-Ala + D-glutamate + ATP <=> UDP-MurNAc-L-Ala-D-Glu + phosphate + ADP + H+ 6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase

UDP-N-acetylmuramoyl-pentapeptide + undecaprenyl_phosphate <=> lipid_I + UMP 2.7.8.13 phospho-N-acetylmuramoyl-pentapeptide-transferase

L-alanyl-tRNA + Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-gamma-D-glutamyl-L-lysyl-(L-alanyl)-D-alanyl-D-alanine <=> tRNAMet + Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-gamma-D-glutamyl-L-lysyl-(L-alanyl-L-alanyl)-D-alanyl-D-alanine 2.3.2

L-alanine + UDP-N-acetylmuramate + ATP <=> H+ + UDP-N-acetylmuramoyl-L-Ala + phosphate + ADP 6.3.2.8 UDP-N-acetylmuramate---L-alanine ligase
6.3.2.B2


UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminoheptanedioate + D-Ala-D-Ala + ATP <=> H+ + UDP-N-acetylmuramoyl-pentapeptide + phosphate + ADP 6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase

(2E,6E)-farnesyl_diphosphate + isopentenyl_diphosphate <=> undecaprenyl_diphosphate + diphosphate 2.5.1.31 ditrans,polycis-undecaprenyl-diphosphate synthase [(2E,6E)-farnesyl-diphosphate specific]
2.5.1.M1


Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol + UDP-N-acetyl-D-glucosamine <=> H+ + lipid_II + UDP 2.4.1.227 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

UDP-MurNAc-L-Ala-D-Glu + meso-2,6-diaminoheptanedioate + ATP <=> H+ + UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminoheptanedioate + phosphate + ADP 6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase

L-alanyl-tRNA + GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol <=> tRNAMet + Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-gamma-D-glutamyl-L-lysyl-(L-alanyl)-D-alanyl-D-alanine 2.3.2.10 UDP-N-acetylmuramoylpentapeptide-lysine N6-alanyltransferase

NADP+ + UDP-N-acetylmuramate <=> H+ + NADPH + UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine 1.3.1.98 UDP-N-acetylmuramate dehydrogenase

Glycyl-tRNA(Gly) + Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-D-isoglutaminyl-L-lysyl-D-alanyl-D-alanine <=> tRNAMet + Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-D-isoglutaminyl-L-lysyl-(glycyl)-D-alanyl-D-alanine 2.3.2.16 lipid II:glycine glycyltransferase

2 Glycyl-tRNA(Gly) + Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-D-isoglutaminyl-L-lysyl-(glycyl)-D-alanyl-D-alanine <=> 2 tRNAMet + N-acetylmuramoyl-L-alanyl-D-isoglutaminyl-L-lysyl-(N6-triglycyl)-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine 2.3.2.17 N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-(N6-glycyl)-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine:glycine glycyltransferase

lipid_I + UDP-N-acetyl-D-glucosamine <=> H+ + lipid_II + UDP 2.4.1.227 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

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